Aucubin

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Aucubin

Names
IUPAC name

(1S,4aR,5S,7aS)-5-Hydroxy-7-(hydroxymethyl)-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-1-yl β-D-glucopyranoside

Systematic IUPAC name

(2S,3R,4S,5S,6R)-2-{[(1S,4aR,5S,7aS)-5-Hydroxy-7-(hydroxymethyl)-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-1-yl]oxy}-6-(hydroxymethyl)oxane-3,4,5-triol

Other names

Aucubin

Identifiers

CAS Number

* 479-98-1 Y

3D model (JSmol)

* Interactive image

Beilstein Reference

| 50340
ChEMBL |

* ChEMBL514882 N

ChemSpider |

* 82585 Y

ECHA InfoCard | 100.006.856
EC Number |

* 207-540-8

KEGG |

* C09771

PubChem CID

* 91458

UNII |

* 2G52GS8UML Y

CompTox Dashboard (EPA)

* DTXSID60963965

InChI

* InChI=1S/C15H22O9/c16-4-6-3-8(18)7-1-2-22-14(10(6)7)24-15-13(21)12(20)11(19)9(5-17)23-15/h1-3,7-21H,4-5H2/t7-,8+,9+,10+,11+,12-,13+,14-,15-/m0/s1 Y

Key: RJWJHRPNHPHBRN-FKVJWERZSA-N Y

* InChI=1/C15H22O9/c16-4-6-3-8(18)7-1-2-22-14(10(6)7)24-15-13(21)12(20)11(19)9(5-17)23-15/h1-3,7-21H,4-5H2/t7-,8+,9+,10+,11+,12-,13+,14-,15-/m0/s1

Key: RJWJHRPNHPHBRN-FKVJWERZBS

SMILES

* O2\C=C/[C@@H]1[C@@H](C(=C/[C@H]1O)\CO)[C@@H]2O[C@@H]3O[C@@H]([C@@H](O)[C@H](O)[C@H]3O)CO

Properties

Chemical formula

| C15H22O9
Molar mass | 346.332 g·mol−1

Except where otherwise noted, data are given for materials in their standard state (at 25 °C [77 °F], 100 kPa).

N verify (what is YN ?)

Infobox references

Chemical compound

Aucubin is an iridoid glycoside.[1] Iridoids are commonly found in plants and function as defensive compounds.[1] Iridoids decrease the growth rates of many generalist herbivores.[2]

## Natural occurrences[edit]

Aucubin, as other iridoids, is found in asterids such as Aucuba japonica (Garryaceae), Eucommia ulmoides (Eucommiaceae), Plantago asiatica, Plantago major, Plantago lanceolata (Plantaginaceae), Galium aparine (Rubiaceae) and others. These plants are used in traditional Chinese and folk medicine.[3]

Agnuside is composed of aucubin and p-hydroxybenzoic acid.[4]

## Health effects[edit]

Aucubin was found to protect against liver damage induced by carbon tetrachloride or alpha-amanitin in mice and rats when 80 mg/kg was dosed intraperitoneally.[5]

## Chemistry[edit]

Aucubin is a monoterpenoid based compound.[6] Aucubin, like all iridoids, has a cyclopentan-[C]-pyran skeleton.[6] Iridoids can consist of ten, nine, or rarely eight carbons in which C11 is more frequently missing than C10.[6] Aucubin has 10 carbons with the C11 carbon missing. The stereochemical configurations at C5 and C9 lead to cis fused rings, which are common to all iridoids containing carbocylclic- or seco-skeleton in non-rearranged form.[6] Oxidative cleavage at C7-C8 bond affords secoiridoids.[7] The last steps in the biosynthesis of iridoids usually consist of O-glycosylation and O-alkylation. Aucubin, a glycoside iridoid, has an O-linked glucose moiety.

## Biosynthesis[edit]

Geranyl pyrophosphate (GPP) is the precursor for iridoids.[8] Geranyl phosphate is generated through the mevalonate pathway or the methylerythritol phosphate pathway.[8] The initial steps of the pathway involve the fusion of three molecules of acetyl-CoA to produce the C6 compound 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA).[8] HMG-CoA is then reduced in two steps by the enzyme HMG-CoA reductase.[8] The resulting mevalonate is then sequentially phosphorylated by two separate kinases, mevalonate kinase and phosphomevalonate kinase, to form 5-pyrophosphomevalonate.[8] Phosphosphomevalonate decarboxylase through a concerted decarboxylation reaction affords isopentenyl pyrophosphate (IPP).[8] IPP is the basic C5 building block that is added to prenyl phosphate cosubstrates to form longer chains.[8] IPP is isomerized to the allylic ester dimethylallyl pyrophosphate (DMAPP) by IPP isomerase.[8] Through a multi-step process, including the dephosphorylation DMAPP, IPP and DMAPP are combined to form the C10 compound geranyl pyrophosphate (GPP).[8] Geranyl pyrophosphate is a major branch point for terpenoid synthesis.[8]

Current[when?] biosynthesis studies suggest that the most probable synthetic sequence from 10-hydroxygerinol to 8-epi-iriotrial is the following: dephosphorylation of GPP, leads to a geranyl cation that is then hydroxylated to form 10-hydroxygeraniol; 10-hydroxylgeraniol is isomerized to 10-hydroxynerol; 10-hydroxynerol is oxidized using NAD to form a trialdehyde; finally the trialdehyde undergoes a double Michael addition to yield 8-epi-iridotrial.[9] 8-Epi-iridotrial is another branch point intermediate.[6]

The cyclization reaction to form the iridoid pyran ring may result from one of two routes:

1. route 1 – a hydride nucleophillic attack on C1 will lead to 1-O-carbonyl atom attack on C3, yielding the lactone ring;
2. route 2 – loss of proton from carbon 4 leads to the formation of a double bond C3-C4; consequently the 3-O-carbonyl atom will attach to C1.[6]

Based on deuterium tracking studies, the biosynthetic pathway for aubucin from the cyclized lactone intermediate is organism specific.[6] In Gardenia jasminoides, the cyclized lactone intermediate is glycosylated to form boschnaloside that is then hydroxylated on C10; boschnaloside is oxidized to geniposidic acid; geniposidic acid is then decarboxylated to form bartisioside; bartisioside is then hydroxylated to form aucubin.[6] The Scrophularia umbrosa biosynthetic pathway is different from Gardenia jasminoides. In Scrophularia umbrosa, the lactone intermediate is glycosylated and oxidized at the C11 carbonyl to form 8-epi-dexoy-loganic acid, which is then converted to deoxygeniposidic acid; deoxygeniposidic acid is hydroxylated at C10 to geniposidic acid; decarboxylation and hydroxylation of C6 leads to aubucin.[10]

## References[edit]

1. ^ a b Nieminen M; Suomi J; Van Nouhuys S (2003). "Effect of iridoid glycoside content on oviposition host plant choice and parasitim in a specialist herbivore". J. Chem. Ecol. 29 (4): 823–843. doi:10.1023/A:1022923514534. PMID 12775146. S2CID 16553547.
2. ^ Puttick G, Bowers M (1998). "Effect of qualitative and quantitative variation in allelochemicals on a generalist insect: Iridoid glycosides and southern armyworm". J. Chem. Ecol. 14 (1): 335–351. doi:10.1007/BF01022550. PMID 24277013. S2CID 28710791.
3. ^ Suh N, Shim C, Lee M, Kim S, Chung I (1991). "Pharmacokinetic Study of an Iridoid Glucoside: Aucubin". Pharmaceutical Research. 08 (8): 1059–1063. doi:10.1023/A:1015821527621. PMID 1924160. S2CID 24135356.
4. ^ Eva Hoberg; Beat Meier & Otto Sticher (September–October 2000). "An analytical high performance liquid chromatographic method for the determination of agnuside and p-hydroxybenzoic acid contents in Agni-casti fructose". Phytochemical Analysis. 11 (5): 327–329. doi:10.1002/1099-1565(200009/10)11:5<327::AID-PCA523>3.0.CO;2-0.
5. ^ Yang K, Kwon S, Choe H, Yun H, Chang I (1983). "Protective effect of Aucuba japonica against carbontetrackmkxmms damage in rat". Drug Chem. Toxicol. 6 (5): 429–441. doi:10.3109/01480548309014165. PMID 6628265.
6. ^ a b c d e f g h Sampio-Santos M, Kaplan M (2001). "Biosynthesis Significance of iridoids in chemosystematics". J. Braz. Chem. Soc. 12 (2): 144–153. doi:10.1590/S0103-50532001000200004.
7. ^ El-Naggar L, Beal J (1980). "Iridoids: a review". J. Nat. Prod. 43 (6): 649–707. doi:10.1021/np50012a001. PMID 20707392.
8. ^ a b c d e f g h i j McGarbey, D; Croteau R (1995). "Terpenoid Metabolism". The Plant Cell. 7 (3): 1015–26. doi:10.1105/tpc.7.7.1015. PMC 160903. PMID 7640522.
9. ^ Nangia A, Prasuna G, Rao P (1997). "Synthesis of cyclopenta[c]pyran skeleton of iridoid lactones". Tetrahedron. 53 (43): 14507–14545. doi:10.1016/S0040-4020(97)00748-5.
10. ^ Damtoft S, Jensen S, Jessen C, Knudsen T (1993). "Late stages in the biosynthesis of aucubin in Scrophularia". Phytochemistry. 35 (5): 1089–1093. Bibcode:1993PChem..33.1089D. doi:10.1016/0031-9422(93)85028-P.

*[CID]: Compound ID
*[EPA]: U.S. Environmental Protection Agency