HgcF RNA

RNA family

HgcF RNA

Predicted secondary structure and sequence conservation of HgcF

Identifiers
Symbol| HgcF
Rfam| RF00058
Other data
RNA type| Gene
Domain(s)| Archaea
SO| SO:0000655
PDB structures| PDBe

The HgcF RNA gene is a non-coding RNA identified computationally and experimentally verified in AT-rich hyperthermophiles.[1] The genes were named hgcA through hgcG ("high GC"). It was later identified as Pab35 H/ACA snoRNA with rRNA targets.[2]

## See also

[edit]

* HgcC family RNA
* HgcE RNA
* HgcG RNA
* SscA RNA

## References

[edit]

1. ^ Klein RJ, Misulovin Z, Eddy SR (May 2002). "Noncoding RNA genes identified in AT-rich hyperthermophiles". Proceedings of the National Academy of Sciences of the United States of America. 99 (11): 7542–7547\. Bibcode:2002PNAS...99.7542K. doi:10.1073/pnas.112063799. PMC 124278. PMID 12032319.7542-7547&rft.date=2002-05&rft_id=https://www.ncbi.nlm.nih.gov/pmc/articles/PMC124278#id-name=PMC&rft_id=info:pmid/12032319&rft_id=info:doi/10.1073/pnas.112063799&rft_id=info:bibcode/2002PNAS...99.7542K&rft.aulast=Klein&rft.aufirst=RJ&rft.au=Misulovin,+Z&rft.au=Eddy,+SR&rft_id=https://www.ncbi.nlm.nih.gov/pmc/articles/PMC124278&rfr_id=info:sid/en.wikipedia.org:HgcF+RNA" class="Z3988">
2. ^ Muller S, Leclerc F, Behm-Ansmant I, Fourmann JB, Charpentier B, Branlant C (May 2008). "Combined in silico and experimental identification of the Pyrococcus abyssi H/ACA sRNAs and their target sites in ribosomal RNAs". Nucleic Acids Research. 36 (8): 2459–2475\. doi:10.1093/nar/gkn077. PMC 2377435. PMID 18304947.2459-2475&rft.date=2008-05&rft_id=https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2377435#id-name=PMC&rft_id=info:pmid/18304947&rft_id=info:doi/10.1093/nar/gkn077&rft.aulast=Muller&rft.aufirst=S&rft.au=Leclerc,+F&rft.au=Behm-Ansmant,+I&rft.au=Fourmann,+JB&rft.au=Charpentier,+B&rft.au=Branlant,+C&rft_id=https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2377435&rfr_id=info:sid/en.wikipedia.org:HgcF+RNA" class="Z3988">

## External links

[edit]

*   * Page for HgcF RNA at Rfam

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