Marie-France Sagot

Director of Research at INRIA

Marie-France Sagot

Sagot receiving her International Society for Computational Biology fellowship

Alma mater| University of São Paulo (BSc)
Paris Diderot University (MAS)
University of Paris-Est Marne-la-Vallée (PhD)
Awards| ISCB Fellow (2019)
Scientific career
Fields| Algorithms
Computational biology[1]
Institutions| French Institute for Research in Computer Science and Automation (INRIA)
Claude Bernard University Lyon 1
King's College London
Thesis| Ressemblance lexicale et structurale entre macromolécules : formalisation et approches combinatoires (1996)
Doctoral advisor| Maxime Crochemore[2] and Alain Viari
Website| team.inria.fr/erable/en/marie-france-sagot/

Marie-France Sagot is a researcher at the French Institute for Research in Computer Science and Automation (INRIA) and responsible for the INRIA European team ERABLE. She is also a member of staff at Claude Bernard University Lyon 1.[2][3][4]

With a PhD and an Habilitation in Computer Science from the University of Marne-la-Vallée in France, she has recognized work on algorithms for computational biology[1] and gene prediction[5] and biological sequence analysis.[6] She has coordinated more than 4 national and 20 international projects since 1998, including the Inria Associated Team Compasso and the OLISSIPO project[7] with Susana Vinga from INESC-ID/IST in Lisbon, Portugal. She has been involved in teaching and teaching organisation, including creating and directing the PhD Program on Computational Biology at the Instituto Gulbenkian de Ciência, Lisbon, Portugal, from 2004 to 2007.

She was elected a Fellow of the International Society for Computational Biology (ISCB) in 2019 for "outstanding contributions to the fields of computational biology and bioinformatics".[8] Since 2002 she has been a visiting research fellow at King's College London.[4] Her main research interests concern computational biology, algorithm analysis and design, and combinatorics.

## References

[edit]

1. ^ a b Marie-France Sagot publications indexed by Google Scholar
2. ^ a b Marie-France Sagot at the Mathematics Genealogy Project
3. ^ Marie-France Sagot at DBLP Bibliography Server
4. ^ a b Sagot, Marie-France (2011). "CURRICULUM VITÆ: Marie-France Sagot" (PDF). Archived from the original (PDF) on 2011-03-31.
5. ^ Mathe, Catherine; Sagot, Marie-France; Schiex, Thomas; Rouzé, Pierre (2002). "Survey and Summary: Current methods of gene prediction, their strengths and weaknesses". Nucleic Acids Research. 30 (19): 4103–4117. doi:10.1093/nar/gkf543. ISSN 1362-4962. PMC 140543. PMID 12364589.
6. ^ Sagot, Marie-France (1998). "Spelling approximate repeated or common motifs using a suffix tree". LATIN'98: Theoretical Informatics. Lecture Notes in Computer Science. Vol. 1380\. pp. 374–390. doi:10.1007/BFb0054337. ISBN 978-3-540-64275-6. ISSN 0302-9743.
7. ^ "OLISSIPO – Fostering Computational Biology Research and Innovation in Lisbon". Retrieved 2024-01-12.
8. ^ "ISCB Fellows". www.iscb.org. Archived from the original on 2017-03-20. Retrieved 2019-04-11.

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Fellows of the International Society for Computational Biology by year of election

2009|

* David Haussler
* David Lipman
* Webb Miller
* David Sankoff
* Temple Smith
* Janet Thornton
* Michael Waterman

2010|

* Russ Altman
* Lawrence Hunter
* Eugene Myers
* Chris Sander
* Gary Stormo
* Alfonso Valencia

2011|

* Michael Ashburner
* Phil Bourne
* Søren Brunak
* Richard Durbin

2012|

* Bonnie Berger
* Peter Karp
* Jill Mesirov
* Pavel Pevzner
* Ron Shamir
* Martin Vingron
* Gunnar von Heijne

2013|

* Pierre Baldi
* David Eisenberg
* Minoru Kanehisa
* Satoru Miyano
* Ruth Nussinov
* Steven Salzberg

2014|

* Amos Bairoch
* Ewan Birney
* Nir Friedman
* Robert Gentleman
* Andrej Šali

2015|

* Rolf Apweiler
* Cyrus Chothia
* Julio Collado-Vides
* Mark Gerstein
* Des Higgins
* Thomas Lengauer
* Michael Levitt
* Burkhard Rost

2016|

* Helen M. Berman
* Steven Brenner
* Dan Gusfield
* Barry Honig
* Janet Kelso
* Michal Linial
* Christine Orengo
* Aviv Regev
* Lincoln Stein
* Sarah Teichmann
* Anna Tramontano
* Shoshana Wodak
* Haim Wolfson

2017|

* Alex Bateman
* Andrea Califano
* Daphne Koller
* Anders Krogh
* William Noble
* Lior Pachter
* Olga Troyanskaya
* Tandy Warnow

2018|

* Patricia Babbitt
* Terry Gaasterland
* Hanah Margalit
* Yves Moreau
* Bernard Moret
* William Pearson
* Mona Singh
* Mike Steel

2019|

* Vineet Bafna
* Eleazar Eskin
* Xiaole Shirley Liu
* Marie-France Sagot

2020|

* Serafim Batzoglou
* Judith Blake
* Mark Borodovsky
* Rita Casadio
* Paul Flicek
* Osamu Gotoh
* Rafael Irizarry
* Laxmi Parida
* Katherine Pollard
* Ben Raphael
* Zhiping Weng
* Xuegong Zhang

2021|

* Atul Butte
* A. Keith Dunker
* Eran Halperin
* Wolfgang Huber
* Sorin Istrail
* Christina Leslie
* Ming Li
* Núria López Bigas
* Dana Pe'er
* Teresa Przytycka
* Eytan Ruppin
* Gustavo Stolovitzky

2022|

* Barbara Bryant
* Sean Eddy
* Mikhail Gelfand
* Takashi Gojobori
* Trey Ideker
* David Jones
* Fran Lewitter
* Jun Liu
* Debora Marks
* Mihai Pop
* Reinhard Schneider

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