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Ammonifex

Topic: Biology

 From HandWiki - Reading time: 2 min

Ammonifex is a Gram-negative, extremely thermophilic, strictly anaerobic and motile genus of bacteria from the family Thermoanaerobacteraceae.[1][2][3][4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[5]

16S rRNA based LTP_10_2024[6][7][8] 120 marker proteins based GTDB 09-RS220[9][10][11]
Ammonifex
 

A. degensii Huber & Stetter 1996

 
 

A. thiophilus Miroshnichenko et al. 2008

 
 
Ammonifex
 

A. degensii

 
 

A. thiophilus

 
 

See also

References

  1. ↑ 1.0 1.1 A.C. Parte. "Ammonifex". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/ammonifex. 
  2. ↑ Parker, Charles Thomas; Osier, Nicole Danielle; Garrity, George M (2009). "Nomenclature Abstract for Ammonifex Huber et al. 1996 emend. Miroshnichenko et al. 2008." (in en). The NamesforLife Abstracts. doi:10.1601/nm.4519. 
  3. ↑ (in en) Ammonifex. https://www.uniprot.org/taxonomy/42837. 
  4. ↑ Huber, Robert (2015). "Ammonifex". Ammonifex. pp. 1–4. doi:10.1002/9781118960608.gbm00744. ISBN 9781118960608. 
  5. ↑ C.L. Schoch. "Ammonifex". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=42837&lvl=3&lin=f&keep=1&srchmode=1&unlock. 
  6. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  7. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  8. ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  9. ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  10. ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  11. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

  • Miroshnichenko, M. L.; Tourova, T. P.; Kolganova, T. V.; Kostrikina, N. A.; Chernych, N.; Bonch-Osmolovskaya, E. A. (1 December 2008). "Ammonifex thiophilus sp. nov., a hyperthermophilic anaerobic bacterium from a Kamchatka hot spring". International Journal of Systematic and Evolutionary Microbiology 58 (12): 2935–2938. doi:10.1099/ijs.0.2008/000182-0. PMID 19060086. 

Wikidata ☰ Q3614457 entry



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