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List of sequenced fungi genomes

Topic: Biology

 From HandWiki - Reading time: 13 min
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This list of sequenced fungi genomes contains all the fungal species known to have publicly available complete genome sequences that have been assembled, annotated and published; draft genomes are not included, nor are organelle only sequences.

This list is incomplete; you can help by expanding it.

Ascomycota

Dothideomycetes

Eurotiomycetes

Leotiomycetes

Pezizomycetes

  • Cladobotryum protrusum (2019[31])
  • Tuber melanosporum Mel28, Périgord black truffle (2010[32])

Saccharomycetes

Schizosaccharomycetes

Sordariomycetes

Basidiomycota

Agaricomycetes

Pucciniomycetes (formerly Urediniomycetes)

Tremellomycetes

Ustilaginomycetes

Wallemiomycetes

Chytridiomycota

Chytridiomycota includes fungi with spores that have flagella (zoospores) and are a sister group to more advanced land fungi that lack flagella. Several chytrid species are pathogens, but have not had their genomes sequenced yet.

Blastocladiomycota

Neocallimastigomycota

Microsporidia

Mucoromycota

Mucoromycotina

Glomeromycotina

Mortierellomycotina

  • Mortierella alpina Strain: ATCC 32222, commercial source of arachidonic acid (2011[123])
  • Lobosporangium transversale
  • Mortierella elongata
  • Mortierella humilis
  • Mortierella multidivaricata
  • Mortierella verticillata

Zoopagomycota

Kickxellomycotina

  • Coemansia reversa
  • Coemansia spiralis
  • Kickxella alabastrina
  • Linderina pennicpora
  • Martensiomyces pterosporus
  • Ramicandelaber brevisporus
  • Smittium culicis
  • Smittium mucronatum
  • Zancudomyces culisetae

Entomophthoromycotina

Zoopagomycotina

  • Syncephalis fuscata
  • Syncephalis plumigaleata
  • Syncephalis pseudoplumigaleata
  • Piptocephalis cylindrospora

See also

External links

References

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  112. ↑ 112.0 112.1 "Update for our Microbial Eukaryotes website users". 29 February 2016. http://www.broadinstitute.org/annotation/genome/multicellularity_project/MultiHome.html. 
  113. ↑ "Home - Gonapodya prolifera v1.0". http://genome.jgi.doe.gov/Ganpr1/Ganpr1.home.html. 
  114. ↑ "Home - Catenaria anguillulae PL171 v1.0". http://genome.jgi.doe.gov/Catan1/Catan1.home.html. 
  115. ↑ "Home - Piromyces sp. E2 v1.0". http://genome.jgi-psf.org/PirE2_1/PirE2_1.home.html. 
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  117. ↑ "The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis". Nature Communications 1 (6): 77. September 2010. doi:10.1038/ncomms1082. PMID 20865802. Bibcode: 2010NatCo...1...77C. 
  118. ↑ "Genomic survey of the non-cultivatable opportunistic human pathogen, Enterocytozoon bieneusi". PLOS Pathogens 5 (1): e1000261. January 2009. doi:10.1371/journal.ppat.1000261. PMID 19132089. 
  119. ↑ "The reduced genome of the parasitic microsporidian Enterocytozoon bieneusi lacks genes for core carbon metabolism". Genome Biology and Evolution 2: 304–9. July 2010. doi:10.1093/gbe/evq022. PMID 20624735. 
  120. ↑ "Genomic analyses of the microsporidian Nosema ceranae, an emergent pathogen of honey bees". PLOS Pathogens 5 (6): e1000466. June 2009. doi:10.1371/journal.ppat.1000466. PMID 19503607. 
  121. ↑ "Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions". Genome Biology 10 (10): R106. 2009. doi:10.1186/gb-2009-10-10-r106. PMID 19807911. 
  122. ↑ "Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication". PLOS Genetics 5 (7): e1000549. July 2009. doi:10.1371/journal.pgen.1000549. PMID 19578406. 
  123. ↑ "Genome characterization of the oleaginous fungus Mortierella alpina". PLOS ONE 6 (12): e28319. 2011. doi:10.1371/journal.pone.0028319. PMID 22174787. Bibcode: 2011PLoSO...628319W. 
  124. ↑ Stajich, Jason E.; Lovett, Brian; Ettinger, Cassandra L.; Carter-House, Derreck A.; Kurbessoian, Tania; Kasson, Matt T. (2022-08-29). Rokas, Antonis. ed. "An Improved 1.5-Gigabase Draft Assembly of Massospora cicadina (Zoopagomycota), an Obligate Fungal Parasite of 13- and 17-Year Cicadas" (in en). Microbiology Resource Announcements 11 (10): e00367–22. doi:10.1128/mra.00367-22. ISSN 2576-098X. PMID 36036589. 



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