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Synthetic Biology Open Language

Topic: Biology

 From HandWiki - Reading time: 2 min
Short description: Standard for exchange of biological designs

The Synthetic Biology Open Language (SBOL)[1] is a proposed data standard for exchanging synthetic biology designs between software packages.[2] It has been under development by the SBOL Developers Group[3] since 2008. This group aims to develop the standard in a way that is open and democratic in order to include as many interests as possible and to avoid domination by a single company. The group also aims to develop and improve the design standard over time as the field of synthetic biology reflects this development.

A graphical modeling language called SBOL Visual has also been created to visualize SBOL designs.[4]

Synthetic Biology Open Language (SBOL) standard visual symbols: promoter, primer binding site, cds, restriction site, etc.

Releases

Version Date
1.0 November 2011
1.1 October 2012
2.0 July 2015
2.1.0 October 2016[5]
3.0 September 2020

References

  1. ↑ "The Synthetic Biology Open Language (SBOL)". http://sbolstandard.org/. 
  2. ↑ Galdzicki, Michal; Clancy, Kevin P; Oberortner, Ernst; Pocock, Matthew; Quinn, Jacqueline Y; Rodriguez, Cesar A; Roehner, Nicholas; Wilson, Mandy L et al. (6 June 2014). "The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology". Nature Biotechnology 32 (6): 545–550. doi:10.1038/nbt.2891. PMID 24911500. 
  3. ↑ "Governance | the Synthetic Biology Open Language (SBOL)". https://sbolstandard.org/development/gov/. 
  4. ↑ Quinn, Jacqueline Y.; Cox, Robert Sidney; Adler, Aaron; Beal, Jacob; Bhatia, Swapnil; Cai, Yizhi; Chen, Joanna; Clancy, Kevin et al. (3 December 2015). "SBOL Visual: A Graphical Language for Genetic Designs". PLOS Biology 13 (12): e1002310. doi:10.1371/journal.pbio.1002310. PMID 26633141. 
  5. ↑ Beal, Jacob; Cox, Robert Sidney; Grünberg, Raik; McLaughlin, James; Nguyen, Tramy; Bartley, Bryan; Bissell, Michael; Choi, Kiri et al. (2016). "Synthetic Biology Open Language (SBOL) Version 2.1.0". Journal of Integrative Bioinformatics 13 (3): 291. doi:10.1515/jib-2016-291. PMID 28187407. 




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