Glycine (symbol Gly or G;[1]/ˈɡlaɪsiːn/(listen)[2]) is an organic compound with the formula C2H5NO2, and is the simplest stable amino acid, distinguished by having a single hydrogen atom as its side chain. As one of the 20 proteinogenic amino acids, glycine is a fundamental building block of proteins in all life and is encoded by all codons starting with GG (GGU, GGC, GGA, and GGG).[3][4] Because of its minimal side chain, it is the only common amino acid that is not chiral, meaning it is superimposable on its mirror image.[5][6]
In the body, glycine plays several crucial roles. Its small and flexible structure is vital for the formation of certain protein structures, most notably in collagen, where glycine makes up about 35% of the amino acid content and enables the tight coiling of the collagen triple helix.[3][7] Glycine disrupts the formation of alpha-helices in secondary protein structure, in favor instead of random coils.[8] Beyond its structural role, glycine functions as an inhibitory neurotransmitter in the central nervous system,[9] particularly in the spinal cord and brainstem, where it helps regulate motor and sensory signals. Disruption of glycine signaling can lead to severe neurological disorders and motor dysfunction;[10] for example, the tetanus toxin causes spastic paralysis by blocking glycine release.[11] It also serves as a key precursor for the synthesis of other important biomolecules, including the porphyrins that form heme in blood and the purines used to build DNA and RNA.[3]
Glycine is a white, sweet-tasting crystalline solid, leading to its name from Greek word glykys (Greek: γλυκύς) or "sweet".[12][2] While the body can synthesize it, it is also obtained from the diet and produced industrially by chemical synthesis for use as a food additive, a nutritional supplement, and an intermediate in the manufacture of products such as the herbicide glyphosate.[13] In aqueous solutions, glycine exists predominantly as a zwitterion (H3N+CH2COO-), a polar molecule with both a positive and negative charge, making it highly soluble in water.[14] It can also fit into hydrophobic environments due to its minimal side chain.[15]
Glycine was discovered in 1820 by French chemist Henri Braconnot when he hydrolyzed gelatin by boiling it with sulfuric acid.[16] He originally called it "sugar of gelatin",[17][18] but French chemist Jean-Baptiste Boussingault showed in 1838 that it contained nitrogen.[19] In 1847 American scientist Eben Norton Horsford, then a student of the German chemist Justus von Liebig, proposed the name "glycocoll";[20][21] however, the Swedish chemist Berzelius suggested the simpler current name a year later.[22][23] The name comes from the Greek word γλυκύς "sweet tasting"[24] (which is also related to the prefixes glyco- and gluco-, as in glycoprotein and glucose). In 1858, the French chemist Auguste Cahours determined that glycine was an amine of acetic acid.[25]
Glycine is also co-generated as an impurity in the synthesis of EDTA, arising from reactions of the ammonia co-product.[31]
Chemical reactions
Its acid–base properties are most important. In aqueous solution, glycine is amphoteric: below pH = 2.4, it converts to the ammonium cation called glycinium. Above about pH 9.6, it converts to glycinate.
Glycine functions as a bidentate ligand for many metal ions, forming amino acid complexes.[32] A typical complex is Cu(glycinate)2, i.e. Cu(H2NCH2CO2)2, which exists both in cis and trans isomers.[33][34]
As a bifunctional molecule, glycine reacts with many reagents. These can be classified into N-centered and carboxylate-center reactions.
Metabolism
Biosynthesis
Glycine is not strictly essential to the human diet, as it is biosynthesized in the body. However, it is considered semi-essential in that the amount that can be biosynthesized is insufficient for all metabolic uses.[39]
In E. coli, antibiotics that target folate depletes the supply of active tetrahydrofolates, halting glycine biosynthesis as a consequence.[41]
In the liver of vertebrates, glycine synthesis is catalyzed by glycine synthase (also called glycine cleavage enzyme). This conversion is readily reversible:[40]
In addition to being synthesized from serine, glycine can also be derived from threonine, choline or hydroxyproline via inter-organ metabolism of the liver and kidneys.[42]
Degradation
Glycine is degraded via three pathways. The predominant pathway in animals and plants is the reverse of the glycine synthase pathway mentioned above. In this context, the enzyme system involved is usually called the glycine cleavage system:[40]
In the second pathway, glycine is degraded in two steps. The first step is the reverse of glycine biosynthesis from serine with serine hydroxymethyl transferase. Serine is then converted to pyruvate by serine dehydratase.[40]
In the third pathway of its degradation, glycine is converted to glyoxylate by D-amino acid oxidase. Glyoxylate is then oxidized by hepatic lactate dehydrogenase to oxalate in an NAD+-dependent reaction.[40]
The half-life of glycine and its elimination from the body varies significantly based on dose.[43] In one study, the half-life varied between 0.5 and 4.0 hours.[43]
Physiological function
The principal function of glycine is it acts as a precursor to proteins. Most proteins incorporate only small quantities of glycine, a notable exception being collagen, which contains about 35% glycine due to its periodically repeated role in the formation of collagen's helix structure in conjunction with hydroxyproline.[40][44] In the genetic code, glycine is coded by all codons starting with GG, namely GGU, GGC, GGA and GGG.[4]
As a biosynthetic intermediate
In higher eukaryotes, δ-aminolevulinic acid, the key precursor to porphyrins, is biosynthesized from glycine and succinyl-CoA by the enzyme ALA synthase. Glycine provides the central C2N subunit of all purines.[40]
As a neurotransmitter
Glycine is an inhibitory neurotransmitter in the central nervous system, especially in the spinal cord, brainstem, and retina. When glycine receptors are activated, chloride enters the neuron via ionotropic receptors, causing an inhibitory postsynaptic potential (IPSP). Strychnine is a strong antagonist at ionotropic glycine receptors, whereas bicuculline is a weak one. Glycine is a required co-agonist along with glutamate for NMDA receptors. In contrast to the inhibitory role of glycine in the spinal cord, this behaviour is facilitated at the (NMDA) glutamatergic receptors which are excitatory.[45] The -1">50 of glycine is 7930 mg/kg in rats (oral),[46] and it usually causes death by hyperexcitability.
As a toxin conjugation agent
Glycine conjugation pathway has not been fully investigated.[47] Glycine is thought to be a hepatic detoxifier of a number endogenous and xenobiotic organic acids.[48]Bile acids are normally conjugated to glycine in order to increase their solubility in water.[49]
The human body rapidly clears sodium benzoate by combining it with glycine to form hippuric acid which is then excreted.[50] The metabolic pathway for this begins with the conversion of benzoate by butyrate-CoA ligase into an intermediate product, benzoyl-CoA,[51] which is then metabolized by glycine N-acyltransferase into hippuric acid.[52]
Uses
In the US, glycine is typically sold in two grades: United States Pharmacopeia ("USP"), and technical grade. USP grade sales account for approximately 80 to 85 percent of the U.S. market for glycine. If purity greater than the USP standard is needed, for example for intravenous injections, a more expensive pharmaceutical grade glycine can be used. Technical grade glycine, which may or may not meet USP grade standards, is sold at a lower price for use in industrial applications, e.g., as an agent in metal complexing and finishing.[53]
Glycine is not widely used in foods for its nutritional value, except in infusions. Instead, glycine's role in food chemistry is as a flavorant. It is mildly sweet, and it counters the aftertaste of saccharine. It also has preservative properties, perhaps owing to its complexation to metal ions. Metal glycinate complexes, e.g. copper(II) glycinate are used as supplements for animal feeds.[30]
Glycine has been researched for its potential to extend life.[57][58] The proposed mechanisms of this effect are its ability to clear methionine from the body, and activating autophagy.[57]
Glycine is a significant component of some solutions used in the SDS-PAGE method of protein analysis. It serves as a buffering agent, maintaining pH and preventing sample damage during electrophoresis.[61] Glycine is also used to remove protein-labeling antibodies from Western blot membranes to enable the probing of numerous proteins of interest from SDS-PAGE gel. This allows more data to be drawn from the same specimen, increasing the reliability of the data, reducing the amount of sample processing, and number of samples required.[62] This process is known as stripping.
Presence in space
The presence of glycine outside the Earth was confirmed in 2009, based on the analysis of samples that had been taken in 2004 by the NASA spacecraft Stardust from comet Wild 2 and subsequently returned to Earth. Glycine had previously been identified in the Murchison meteorite in 1970.[63] The discovery of glycine in outer space bolstered the hypothesis of so-called soft-panspermia, which claims that the "building blocks" of life are widespread throughout the universe.[64] In 2016, detection of glycine within Comet 67P/Churyumov–Gerasimenko by the Rosetta spacecraft was announced.[65]
Glycine is proposed to be defined by early genetic codes.[67][68][69][70] For example, low complexity regions (in proteins), that may resemble the proto-peptides of the early genetic code are highly enriched in glycine.[70]
↑ 3.03.13.2Berg, Jeremy M.; Tymoczko, John L.; Gatto, Gregory J. Jr.; Stryer, Lubert (2015). Biochemistry (8th ed.). New York: W. H. Freeman and Company. p. 35. ISBN978-1-4641-2610-9.
↑"Achiral amino acid glycine acts as an origin of homochirality in asymmetric autocatalysis". Organic & Biomolecular Chemistry17 (17): 4200–4203. April 2019. doi:10.1039/C9OB00345B. PMID30932119.
↑Kihara, H.; Yamamoto, Y.; Sato, T.; Yamazaki, Y.; Sakakibara, S.; Yamaguchi, S.; Trans-yamazaki, M.; Inokuchi, K. (2004). "Kirk-Othmer Encyclopedia of Chemical Technology". Kirk-Othmer Encyclopedia of Chemical Technology. John Wiley & Sons. doi:10.1002/0471238961.0113091411090801.a01.pub2.
↑Drauz, Karlheinz; Gröger, Harald; Han, Oliver (2000). "Ullmann's Encyclopedia of Industrial Chemistry". Ullmann's Encyclopedia of Industrial Chemistry. Weinheim: Wiley-VCH. doi:10.1002/14356007.a02_057. ISBN3-527-30673-0.
↑Haynes, William M., ed (2017). CRC Handbook of Chemistry and Physics (97th ed.). Boca Raton: CRC Press. p. 5-92. ISBN978-1-4987-5429-3.
↑Jahres-Bericht über die Fortschritte der Chemie und Mineralogie (Annual Report on the Progress of Chemistry and Mineralogy). 47. Tübigen, (Germany): Laupp. 1848. p. 654. https://books.google.com/books?id=mDc4AQAAIAAJ&q=%22glycin%22&pg=PA654. From p. 654: "Er hat dem Leimzucker als Basis den Namen Glycocoll gegeben. ... Glycin genannt werden, und diesen Namen werde ich anwenden." (He [i.e., the American scientist Eben Norton Horsford, then a student of the German chemist Justus von Liebig] gave the name "glycocoll" to Leimzucker [sugar of gelatine], a base. This name is not euphonious and has besides the flaw that it clashes with the names of the rest of the bases. It is compounded from γλυχυς (sweet) and χολλα (animal glue). Since this organic base is the only [one] which tastes sweet, then it can much more briefly be named "glycine", and I will use this name.)
↑Tomiyasu, Hiroshi.; Gordon, Gilbert. (April 1976). "Ring closure in the reaction of metal chelates. Formation of the bidentate oxovanadium(IV)-glycine complex". Inorganic Chemistry15 (4): 870–874. doi:10.1021/ic50158a027.
↑"Combined Ab Initio Computational and Infrared Spectroscopic Study of the cis- and trans-Bis(glycinato)copper(II) Complexes in Aqueous Environment". The Journal of Physical Chemistry Letters4 (9): 1502–1506. May 2013. doi:10.1021/jz400288c. PMID26282305.
↑"X-ray Absorption Study of Copper(II)−Glycinate Complexes in Aqueous Solution". The Journal of Physical Chemistry B102 (17): 3114–3122. April 1998. doi:10.1021/jp973476m.
↑"Peptide bond formation via glycine condensation in the gas phase". The Journal of Physical Chemistry B118 (29): 8583–8590. July 2014. doi:10.1021/jp504924c. PMID24992687.
↑Meléndez-Hevia, Enrique; De Paz-Lugo, Patricia; Cornish-Bowden, Athel; Cárdenas, María Luz (December 2009). "A weak link in metabolism: the metabolic capacity for glycine biosynthesis does not satisfy the need for collagen synthesis". Journal of Biosciences34 (6): 853–872. doi:10.1007/s12038-009-0100-9. ISSN0973-7138. PMID20093739.
↑"Glycine metabolism in animals and humans: implications for nutrition and health". Amino Acids45 (3): 463–477. September 2013. doi:10.1007/s00726-013-1493-1. PMID23615880.
↑"Conservation of the coding regions of the glycine N-acyltransferase gene further suggests that glycine conjugation is an essential detoxification pathway". Gene571 (1): 126–134. October 2015. doi:10.1016/j.gene.2015.06.081. PMID26149650.
↑"A new perspective on the importance of glycine conjugation in the metabolism of aromatic acids". Drug Metabolism Reviews46 (3): 343–361. August 2014. doi:10.3109/03602532.2014.908903. PMID24754494.
↑"Final report on the safety assessment of Benzyl Alcohol, Benzoic Acid, and Sodium Benzoate". International Journal of Toxicology20 Suppl 3 (3_suppl): 23–50. January 2001. doi:10.1080/10915810152630729. PMID11766131.
↑"Multiple immunoreplica Technique: screening for specific proteins with a series of different antibodies using one polyacrylamide gel". Analytical Biochemistry111 (2): 385–392. March 1981. doi:10.1016/0003-2697(81)90577-7. PMID6166216.