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AgBase

Topic: Earth

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AgBase
Content
Descriptionfunctional genomics resource for agriculture.
Contact
Research centreUniversity of Arizona
Author(s)Fiona M McCarthy
Primary citationMcCarthy & al. (2006)[1]
Release date2006
Access
Websitehttp://agbase.arizona.edu/

AgBase is a curated genomic database containing functional annotations of agriculturally important animals, plants, microbes and parasites.[1] AgBase biocurators provides annotation of Gene Ontology terms and Plant ontology terms for gene products.[2] By 2011 AgBase provided information for 18 organisms including horse, cat, dog, cotton, rice and soybean.[3]

See also

References

  1. ↑ 1.0 1.1 McCarthy, Fiona M; Wang Nan; Magee G Bryce; Nanduri Bindu; Lawrence Mark L; Camon Evelyn B; Barrell Daniel G; Hill David P et al. (2006). "AgBase: a functional genomics resource for agriculture". BMC Genomics (England) 7: 229. doi:10.1186/1471-2164-7-229. PMID 16961921. 
  2. ↑ Pillai, L; Chouvarine, P; Tudor, C. O.; Schmidt, C. J.; Vijay-Shanker, K; McCarthy, F. M. (2012). "Developing a biocuration workflow for Ag Base, a non-model organism database". Database 2012: bas038. doi:10.1093/database/bas038. PMID 23160411. 
  3. ↑ McCarthy, F. M.; Gresham, C. R.; Buza, T. J.; Chouvarine, P; Pillai, L. R.; Kumar, R; Ozkan, S; Wang, H et al. (2011). "Ag Base: Supporting functional modeling in agricultural organisms". Nucleic Acids Research 39 (Database issue): D497–506. doi:10.1093/nar/gkq1115. PMID 21075795. 




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