This is a list of notable Islamic universities and colleges, and modern universities and institutes within the Muslim names in India.
- Al-Jame-atul-Islamia, Faizabad
- Al Jamiatul Ashrafia, Mubarakpur, Azamghar, Uttar Pradesh
- Aljamea-tus-Saifiyah, Surat and Mumbai.
- Arusiyyah Madrasah, Kilakarai, Tamil Nadu
- Baqiyat Salihat Arabic College, Vellur, Tamil Nadu
- Coordination of Islamic Colleges (WAFY) Malappuram, Kerala
- Darul Huda Islamic University, Chemmad, Kerala
- Darul Uloom Deoband
- Darul Uloom Nadwatul Ulama, Lucknow
- Darul Uloom Raheemiyyah, Bandipora, Kashmir
- Jamiatul Qasim Darul Uloom Al-Islamiah, Supaul
- Jamia Amjadia Rizvia, Ghosi, Uttar Pradesh
- Jamia Arifia, Saiyed Sarawan, Uttar Pradesh
- Jamia Darussalam, Oomerabad, Tamil Nadu
- Jamia Islamia Bhatkal, Bhatkal, Karnataka
- Jamia Nizamia, Hyderabad, Telangana
- Jami'a Nooriyya Arabic College, Pattikkad, Perinthalmanna, Kerala
- Jamia Nusrathul Islam, Randathani, Kerala
- Jamiatur Raza, Bareilly, Uttar Pradesh
- Jamia Islamia Ishaatul Uloom, Akkalkuwa
- Jamia Qasmia Madrasa Shahi, Moradabad, Uttar Pradesh
- Jamiathul Hind Al Islamiyya, Calicut, Kerala
- Manzar-e-Islam, Bareilly, Uttar Pradesh
- Madrasa Aminia Islamia Arabia, Kashmiri Gate, Delhi
- Markazu Saquafathi Sunniyya, Kozhikode, Kerala
- Ma'din academy, Malappuram, Kerala
- Jamia Imam Muhammad Anwar Shah, Deoband, Uttar Pradesh
- Darul Uloom Banskandi, Banskandi, Cachar district, Assam
- Darul Uloom Mau, Mau, Uttar Pradesh
- Jamia Miftahul Uloom, Mau, Uttar Pradesh
- Rahmaniyya Arabic College, Katameri Kerala
Modern universities
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- Aliah University, Kolkata, West Bengal
- Aligarh Muslim University, Aligarh, Uttar Pradesh
- B.S. Abdur Rahman Crescent Institute of Science and Technology, Vandalur, Tamil Nadu
- Jamia Hamdard, New Delhi, Delhi
- Jamia Millia Islamia, New Delhi, Delhi
- Khwaja Moinuddin Chishti Language University, Lucknow, Uttar Pradesh
- Mohammad Ali Jauhar University, Rampur, Uttar Pradesh, Uttar Pradesh
- Integral University, Lucknow, Uttar Pradesh
- Maulana Mazharul Haque Arabic and Persian University, Patna, Bihar
- Al-Karim University, Katihar, Bihar
- Noorul Islam Centre for Higher Education, Kumarakovil
- Osmania University, Hyderabad, Telangana
- Islamic University of Science and Technology, Awantipora, Jammu and Kashmir
- Khaja Bandanawaz University, Gulbarga, Karnataka
- Maulana Azad University, Jodhpur, Rajasthan [3]
- Jamia markaz, Kozhikode
- Markaz knowledge City, kaithappoyil, Kozhikode
- Darul Huda Islamic University
- Coordination of Islamic Colleges
- Farook College, Kozhikode
- Ma'din Academy, Swalath Nagar
- Madeenathul Uloom Arabic College, Pulikkal, Malappuram
- Markaz Law College, Kozhikode, Kerala
- MEA Engineering College, Malappuram, Kerala
- Muslim Educational Society, Kerala
- Academy of Sharia and Advanced Studies
- Pocker Sahib Memorial Orphanage College, Tirurangadi
- Thangal Kunju Musaliar College of Engineering, Kollam
- Halim Muslim PG College, Kanpur
- Shia PG College, Lucknow
- Ibn Sina Academy of Medieval Medicine and Sciences, Aligarh
- Jamia Al Barkaat, Aligarh
- SKBM Degree College, Dildarnagar
- Shibli National College, Azamgarh, Azamgarh
- Asim Siddique Memorial Degree College,Budaun
- FH Medical College and Hospital, Agra Road
- Career Medical College and Hospital, Lucknow
- Era Medical College and Hospital, Lucknow
- Integral Institute of Medical Sciences, Lucknow
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