Short description: Japanese research society
| Abbreviation | JSBi |
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| Formation | 1999 (1999) |
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| Type | Learned society |
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Membership (2018) | 512[1] |
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President | Wataru Iwasaki |
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| Affiliations | International Society for Computational Biology |
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| Website | www.jsbi.org/en/ |
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The Japanese Society for Bioinformatics (JSBi) is a Japanese research society on the subjects of bioinformatics and computational biology established in 1999.[2] The society is an affiliated regional group of the International Society for Computational Biology (ISCB),[3] and a member of Association of Asian Societies for Bioinformatics (AASBi). Supporting corporate members include the Japanese companies Hitachi, Fujitsu and Shionogi.[2][4]
Since 2001, the JSBi and Oxford University Press have awarded the Japanese Society for Bioinformatics Prize for outstanding young scientists in bioinformatics.[5][6]
Presidents
The following people have been president of the JSBi:
- Minoru Kanehisa, Kyoto University (1999–2004)
- Satoru Miyano, The University of Tokyo (2004–2005)
- Yukihiro Eguchi, Mitsui Knowledge Industry Co., Ltd (2005–2006)
- Kenta Nakai, The University of Tokyo (2006–2008)
- Osamu Gotoh, Kyoto University (2008–2010)
- Hideo Matsuda, Osaka University (2010–2013)
- Kiyoshi Asai (scientist), The University of Tokyo (2013–2015)
- Kentaro Shimizu (scientist), The University of Tokyo (2015–2017)
- Kengo Kinoshita, Tohoku University (2017–2019)
- Wataru Iwasaki, The University of Tokyo (2019–)
References
- ↑ "Japanese Society for Bioinformatics - JSBi :: About JSBi" (in en). http://www.jsbi.org/en/about/. Retrieved 24 February 2017.
- ↑ 2.0 2.1 Nakai, Kenta (15 August 2007). "THE JAPANESE SOCIETY OF BIOINFORMATICS (JSBi)". Asia-Pacific Biotech News 11 (15): 1056–1057. doi:10.1142/S0219030307001140.
- ↑ "Affiliates & COSIs". https://www.iscb.org/iscb-affiliates-cosis. Retrieved 24 February 2017.
- ↑ "Japanese Society for Bioinformatics - JSBi :: 賛助会員" (in Japanese). https://www.jsbi.org/about/corporate_members/. Retrieved 29 September 2020.
- ↑ "Japanese Society for Bioinformatics - JSBi :: Oxford Journals - JSBi Prize". https://www.jsbi.org/en/ojp/. Retrieved 29 September 2020.
- ↑ "Japanese Society for Bioinformatics - JSBi :: home". https://www.jsbi.org/en/.
External links
Bioinformatics |
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| Databases |
- Sequence databases: GenBank, European Nucleotide Archive and DNA Data Bank of Japan
- Secondary databases: UniProt, database of protein sequences grouping together Swiss-Prot, TrEMBL and Protein Information Resource
- Other databases: Protein Data Bank, Ensembl and InterPro
- Specialised genomic databases: BOLD, Saccharomyces Genome Database, FlyBase]], VectorBase]], WormBase, PHI-base, Arabidopsis Information Resource and Zebrafish Information Network
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| Software |
- BLAST
- Bowtie
- Clustal
- HMMER
- MUSCLE
- SAMtools
- TopHat
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| Other |
- Server: ExPASy
- Ontology: Gene Ontology
- Rosalind (education platform)
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| Institutions |
- Broad Institute
- Computational Biology Department (CBD)
- Microsoft Research - University of Trento Centre for Computational and Systems Biology (COSBI)
- Database Center for Life Science (DBCLS)
- DNA Data Bank of Japan (DDBJ)
- European Bioinformatics Institute (EMBL-EBI)
- European Molecular Biology Laboratory (EMBL)
- Flatiron Institute
- J. Craig Venter Institute (JCVI)
- Max Planck Institute of Molecular Cell Biology and Genetics (MPI-CBG)
- US National Center for Biotechnology Information (NCBI)
- Japanese Institute of Genetics
- Netherlands Bioinformatics Centre (NBIC)
- Philippine Genome Center (PGC)
- Scripps Research
- Swiss Institute of Bioinformatics (SIB)
- Wellcome Sanger Institute
- Whitehead Institute
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| Organizations |
- African Society for Bioinformatics and Computational Biology (ASBCB)
- Australia Bioinformatics Resource (EMBL-AR)
- European Molecular Biology network (EMBnet)
- International Nucleotide Sequence Database Collaboration (INSDC)
- International Society for Biocuration (ISB)
- International Society for Computational Biology (ISCB)
- Student Council (ISCB-SC)
- Institute of Genomics and Integrative Biology (CSIR-IGIB)
- Japanese Society for Bioinformatics (JSBi)
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| Meetings |
- Basel Computational Biology Conference ([BC2])
- European Conference on Computational Biology (ECCB)
- Intelligent Systems for Molecular Biology (ISMB)
- International Conference on Bioinformatics (InCoB)
- ISCB Africa ASBCB Conference on Bioinformatics
- Pacific Symposium on Biocomputing (PSB)
- Research in Computational Molecular Biology (RECOMB)
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| File formats |
- CRAM format
- FASTA format
- FASTQ format
- NeXML format
- Nexus format
- Pileup format
- SAM format
- Stockholm format
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| Related topics |
- Computational biology
- List of biological databases
- Molecular phylogenetics
- Sequencing
- Sequence database
- Sequence alignment
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Category
Commons
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 | Original source: https://en.wikipedia.org/wiki/Japanese Society for Bioinformatics. Read more |